BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H04SP1|AL430451
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig399 1688 0.0
>3x_Contig399
Length = 2300
Score = 1688 bits (851), Expect = 0.0
Identities = 865/867 (99%), Gaps = 2/867 (0%)
Strand = Plus / Minus
Query: 6 tccaatcgcaagatccaagatgaagatcaaggtagctgtgaacttggagactgcaggatc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 tccaatcgcaagatccaagatgaagatcaaggtagctgtgaacttggagactgcaggatc 2069
Query: 66 atcagaactcattgaacaattaaatactctaataagatctggccaaacaagtcaaacaga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 atcagaactcattgaacaattaaatactctaataagatctggccaaacaagtcaaacaga 2009
Query: 126 aacagcctggacaagtatagggttaatagatccagtggcatacagggaacttgttaacat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 aacagcctggacaagtatagggttaatagatccagtggcatacagggaacttgttaacat 1949
Query: 186 ctgtaatcaaaaggcaacattacaagtgttagatatggctgtgatagaagag-tctaatt 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1948 ctgtaatcaaaaggcaacattacaagtgttagatatggctgtgatagaagaggtctaatt 1889
Query: 245 aaaga-tacattatagtatatgtagctcactagtttacacattattgaggcatttcccgt 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 aaagagtacattatagtatatgtagctcactagtttacacattattgaggcatttcccgt 1829
Query: 304 attcttttgcacttaagttcaattcacatatgcttctttcacagcatttaatagaaatat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1828 attcttttgcacttaagttcaattcacatatgcttctttcacagcatttaatagaaatat 1769
Query: 364 caacttctcaaattcatttgattgagacttcctccataactttgtacttagagtgataac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1768 caacttctcaaattcatttgattgagacttcctccataactttgtacttagagtgataac 1709
Query: 424 aaagtctggcacactggctcctacttctgacccaagagttggtaggatgactcgttcata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1708 aaagtctggcacactggctcctacttctgacccaagagttggtaggatgactcgttcata 1649
Query: 484 taactgggctatttgtgtgcaaatgattggaattttcatgtcattagagtcacctaattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 taactgggctatttgtgtgcaaatgattggaattttcatgtcattagagtcacctaattt 1589
Query: 544 cgttatgacatcgtaatgggaaagcggatcatttacaggagcatagtcactatcgtcatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 cgttatgacatcgtaatgggaaagcggatcatttacaggagcatagtcactatcgtcatc 1529
Query: 604 accaccatcaagcacaaatcgggcctctgtgtcattcaaacctttagatttcacttcgta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 accaccatcaagcacaaatcgggcctctgtgtcattcaaacctttagatttcacttcgta 1469
Query: 664 tgtagaatccatctcaccatttactcgaagttgtagcactatcttattgtcataatgatt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 tgtagaatccatctcaccatttactcgaagttgtagcactatcttattgtcataatgatt 1409
Query: 724 ggcaaatatgcctaattcaccgggaaaatcactaaagacttccggatctaactgtttttg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 ggcaaatatgcctaattcaccgggaaaatcactaaagacttccggatctaactgtttttg 1349
Query: 784 aaattcaatgaatctcatgttgcaccttgaatgaattcaaattatcacttgctttattac 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 aaattcaatgaatctcatgttgcaccttgaatgaattcaaattatcacttgctttattac 1289
Query: 844 tgtggtatcttttgtttacatatttgg 870
|||||||||||||||||||||||||||
Sbjct: 1288 tgtggtatcttttgtttacatatttgg 1262
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6670
Number of Sequences: 1807
Number of extensions: 6670
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)